Query   'ND1 domain'  matched   4 Records

Record No : 1

Instance ID12165
Regular ExpressionRx{0,3}AxAAxxR
Motif InstanceRAKLAEAAERR
Bait Uniprot AccessionP0C0A9
Bait Uniprot IdentifierSVIP_RAT
Bait Gene NameSvip
Bait OrganismRattus norvegicus (Rat)
Sequence Position22-32
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureCoil
Experimental Method(s)Sequence based prediction; Pull down(GST tag)
Interaction ID22165
Interacting DomainND1 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)12529442
CommentsThe VCP-interacting motif (VIM) in rat Small VCP/p97-interacting protein (Svip) that mediates interaction with rat Transitional endoplasmic reticulum ATPase (Vcp)

Record No : 2

Instance ID12166
Regular ExpressionRx{0,3}AxAAxxR
Motif InstanceRRMLAAAAERR
Bait Uniprot AccessionQ9R049
Bait Uniprot IdentifierAMFR_MOUSE
Bait Gene NameAmfr
Bait OrganismMus musculus (Mouse)
Sequence Position626-636
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureAlpha helix
Experimental Method(s)Mutation analysis; Pull down(GST tag)
Interaction ID22166
Interacting DomainND1 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)16987818
CommentsThe VCP-interacting motif (VIM) in mouse E3 ubiquitin-protein ligase Amfr (gp78) that mediates interaction with mouse Transitional endoplasmic reticulum ATPase (TER ATPase) Vcp

Record No : 3

Instance ID12168
Regular ExpressionRx{0,3}AxAAxxR
Motif InstanceRALAAERR
Bait Uniprot AccessionQ80UU1
Bait Uniprot IdentifierANKZ1_MOUSE
Bait Gene NameAnkzf1
Bait OrganismMus musculus (Mouse)
Sequence Position680-687
Critical ResiduesP7; P8
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Mutation analysis; Co-IP
Interaction ID22168
Interacting DomainND1 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)21070972
CommentsThe VCP-interacting motif (VIM) in mouse Ankyrin repeat and zinc finger domain-containing protein 1 (Ankzf1/vms-1) that mediates interaction with mouse Transitional endoplasmic reticulum ATPase (TER ATPase) Vcp

Record No : 4

Instance ID12169
Regular ExpressionRx{0,3}AxAAxxR
Motif InstanceRKEEKEKKRRR
Bait Uniprot AccessionQ9Y5A7
Bait Uniprot IdentifierNUB1_HUMAN
Bait Gene NameNUB1
Bait OrganismHomo sapiens (Human)
Sequence Position422-432
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureAlpha helix
Experimental Method(s)Sequence based prediction; Pull down(GST tag); NMR
Interaction ID22169
Interacting DomainND1 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)24100225
CommentsThe VCP-interacting motif (VIM) in Human NEDD8 ultimate buster 1 (NUB1) that mediates binding to human Transitional endoplasmic reticulum ATPase VCP


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For queries, suggestions and submission of novel motifs please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in)